dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001063_32|CGC5
Gene ID: MGYG000001063_01240
Location and strand information: 172344 - 173399 (+)
Family: 3.A.15.2.1
Protein type: TC
Protein description: Twitching mobility protein

Gene clsuter ID: MGYG000001063_32|CGC5
Gene ID: MGYG000001063_01241
Location and strand information: 173411 - 174211 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaS

Gene clsuter ID: MGYG000001063_32|CGC5
Gene ID: MGYG000001063_01242
Location and strand information: 174348 - 175670 (+)
Family: GH4
Protein type: CAZyme
Protein description: Alpha-galactosidase
Protein isoelectric point: 4.8565
Protein molecular weight: 49633.9
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001063_32|CGC5
Gene ID: MGYG000001063_01243
Location and strand information: 175807 - 176724 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_32|CGC5
Gene ID: MGYG000001063_01244
Location and strand information: 177109 - 178020 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Arabinose operon regulatory protein

Gene clsuter ID: MGYG000001063_32|CGC5
Gene ID: MGYG000001063_01245
Location and strand information: 178087 - 178917 (-)
Family: 3.A.1.1.36
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000001063_32|CGC5
Gene ID: MGYG000001063_01246
Location and strand information: 178932 - 179828 (-)
Family: 3.A.1.1.20
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000001063_32|CGC5
Gene ID: MGYG000001063_01247
Location and strand information: 179988 - 181352 (-)
Family: 3.A.1.1.44
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_32|CGC5
Gene ID: MGYG000001063_01248
Location and strand information: 182071 - 182727 (+)
Family: 9.B.28.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_32|CGC5
Gene ID: MGYG000001063_01249
Location and strand information: 182890 - 185082 (-)
Family: GH36
Protein type: CAZyme
Protein description: Bifunctional alpha-galactosidase/sucrose kinase AgaSK
Protein isoelectric point: 5.0509
Protein molecular weight: 82936.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001063_32|CGC5
Gene ID: MGYG000001063_01250
Location and strand information: 185504 - 186862 (+)
Family: Citrate_synt
Protein type: STP
Protein description: 2-methylcitrate synthase

Gene clsuter ID: MGYG000001063_32|CGC5
Gene ID: MGYG000001063_01251
Location and strand information: 186864 - 187331 (+)
Family: MarR
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_32|CGC5
Gene ID: MGYG000001063_01252
Location and strand information: 187425 - 188063 (-)
Family: 2.A.115.2.14
Protein type: TC
Protein description: Cytidylate kinase

Gene clsuter ID: MGYG000001063_32|CGC5
Gene ID: MGYG000001063_01253
Location and strand information: 188082 - 188792 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: High-affinity branched-chain amino acid transport ATP-binding protein LivF

Gene clsuter ID: MGYG000001063_32|CGC5
Gene ID: MGYG000001063_01254
Location and strand information: 188803 - 189561 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: Lipopolysaccharide export system ATP-binding protein LptB

Gene clsuter ID: MGYG000001063_32|CGC5
Gene ID: MGYG000001063_01255
Location and strand information: 189564 - 190535 (-)
Family: 3.A.1.4.8
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001063_32|CGC5
Gene ID: MGYG000001063_01256
Location and strand information: 190544 - 191431 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: High-affinity branched-chain amino acid transport system permease protein LivH

Gene clsuter ID: MGYG000001063_32|CGC5
Gene ID: MGYG000001063_01257
Location and strand information: 191729 - 192973 (-)
Family: 3.A.1.4.10
Protein type: TC
Protein description: hypothetical protein

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is raffinose download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001063_01240	Twitching mobility protein	TC	172344	173399	+	3.A.15.2.1
MGYG000001063_01241	HTH-type transcriptional activator RhaS	TF	173411	174211	-	HTH_AraC+HTH_AraC
MGYG000001063_01242	Alpha-galactosidase	CAZyme	174348	175670	+	GH4
MGYG000001063_01243	hypothetical protein	null	175807	176724	-	No domain
MGYG000001063_01244	Arabinose operon regulatory protein	TF	177109	178020	+	HTH_AraC+HTH_AraC
MGYG000001063_01245	L-arabinose transport system permease protein AraQ	TC	178087	178917	-	3.A.1.1.36
MGYG000001063_01246	Lactose transport system permease protein LacF	TC	178932	179828	-	3.A.1.1.20
MGYG000001063_01247	hypothetical protein	TC	179988	181352	-	3.A.1.1.44
MGYG000001063_01248	hypothetical protein	TC	182071	182727	+	9.B.28.1.3
MGYG000001063_01249	Bifunctional alpha-galactosidase/sucrose kinase AgaSK	CAZyme	182890	185082	-	GH36
MGYG000001063_01250	2-methylcitrate synthase	STP	185504	186862	+	Citrate_synt
MGYG000001063_01251	hypothetical protein	TF	186864	187331	+	MarR
MGYG000001063_01252	Cytidylate kinase	TC	187425	188063	-	2.A.115.2.14
MGYG000001063_01253	High-affinity branched-chain amino acid transport ATP-binding protein LivF	TC	188082	188792	-	3.A.1.4.10
MGYG000001063_01254	Lipopolysaccharide export system ATP-binding protein LptB	TC	188803	189561	-	3.A.1.4.10
MGYG000001063_01255	hypothetical protein	TC	189564	190535	-	3.A.1.4.8
MGYG000001063_01256	High-affinity branched-chain amino acid transport system permease protein LivH	TC	190544	191431	-	3.A.1.4.10
MGYG000001063_01257	hypothetical protein	TC	191729	192973	-	3.A.1.4.10
Protein ID	Protein Name	Type	Start	End	Strand	Signature